CDS

Accession Number TCMCG007C37024
gbkey CDS
Protein Id XP_009149480.1
Location join(8334217..8334331,8334526..8334641,8334733..8334831,8334908..8334964,8335043..8335198,8335289..8335373,8335447..8335702,8335788..8335910,8336023..8336234,8336308..8337398,8337483..8337673,8337752..8337881)
Gene ARF5-3
GeneID 103872791
Organism Brassica rapa

Protein

Length 876aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009151232.3
Definition auxin response factor 5 isoform X3 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K14486        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04075        [VIEW IN KEGG]
map04075        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000578        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0003002        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007389        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009733        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009798        [VIEW IN EMBL-EBI]
GO:0009880        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009942        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010051        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010305        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048507        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATGGCTTCTGTTGAGGAGAAGATGAAAACAAATGGTTTGGTTAACGGAGGAACAACAACAACATCTCAGTCTTCTCTGCTTGAAGAGATGAAGCTGTTGACGGATCAGTCAGGAACGAGAAAGCCGGTAATAAACTCGGAGCTATGGCACGCTTGTGCAGGTCCTCTGGTTTGTCTCCCTCAAGTTGGGAGCTTAGTGTATTACTTCTCACAAGGTCATAGTGAACAGGTTGCTGTTTCAACCAGAAGGTCTGCAACAACACAAGTTCCTAACTACCCAAATCTACCATCTCAGTTGATGTGCCAAGTCCATAATGTTACCCTTCATGCAGACAAAGACAGTGACGAAATTTATGCTCAGATGAGTCTACAACCTGTTCACTCTGAGAGAGATGTGTTCCCAGTACCAGACTTTGGACTATTGAACAGAAGCAAGCATCCAGCTGAGTTTTTCTGCAAAACGCTTACTGCTAGTGATACAAGTACACATGGAGGTTTCTCTGTCCCACGTAGAGCTGCAGAGAAGCTATTCCCACCGTTGGACTACACAGCACAGCCACCAACGCAGGAGCTTGTAGTTAGAGATCTTCATGAGAATACTTGGACATTTCGCCATATCTATCGAGGGCAGCCAAAGAGGCATCTCCTGACAACAGGATGGAGTTTGTTTGTTGGCTCAAAGAGACTGAGAGCTGGAGATTCTGTTTTGTTCATCAGGGATGAGAAGTCTCAACTGATGGTTGGTGTGAGGCGAGCTAACCGCCAACAAACAGCTCTTCCTTCATCTGTTCTCTCAGCAGACAGTATGCACATCGGTGTTCTAGCTGCTGCGGCTCACGCAACTGCAAACCGCACTCCTTTCTTGATTTTCTATAATCCAAGAGCGTGTCCAGCAGAGTTTGTAATCCCTCTAGCTAAGTACCGGAAGGCTATATGTGGGGCTCAGCTCTCAGCTGGTATGAGGTTTGGAATGATGTTTGAAACTGAGGATTCAGGGAAACGTAGATACATGGGAACCATTGTTGGAATCAGCGATATGGATCCGTTGAGATGGTCTGGTTCTAAGTGGCGTAACCTACAAGTTGAATGGGATGAGCCTGGATGTAACGACAAACCTACTAGGGTCAGTCCATGGGATATTGAAACACCTGAGAGTCTCTTCATTTTTCCTTCTCTCACCTCAGGACTCAAACGTCAGCTCCATCCATCTTACTTTGCTGCTGGTGAAACCGAATGGGGAAGCTTGATCAAACGTCCTCTAATCCGTGATTCCACAAATGGGATTCTGCCTTACGCATCATTCCCAAACATGGCTTCAGAGCAGCTTATGAGAATGATGATGAGAACTCACAACAACAACAACAACCAGAATGCATCCTCTTTCATGTCTGAGATGCAGCAGAATCTTTTAATGGGGCATGGAGGTTTACTAGGAGATATGAATATGCAGCAGCAGCCAATGGTATCTGAGATGGTGCAACCAGAAAGCAAGCTAACTGTGAACCCATCTGCTTCCAATACAAGTGGCCAAGAACAGAATCTGTCTCAGAGTATGAGTGCTCCTCCAAAACCGACTCTCTCTGGTTGCAACTCTGGGAGAGTTAACCATGGAAATGAGCAGAAGTCAGTGGAACAGGCTAGCCAGGTGAGAACAGTCGCTGTGTGTAATGAGTCAGCGTTGTCTCCATTACAAGCTGATCCATGTCCTGACACAAGTCAACAGATATACCCACCACAGTCTGATCCAATAAACGGATTCTCTTTCTTGGAAACGGAAGAGCTGACATCACAAGTCTCATCCTTCCAGTCACTTGCCGGATCATACAAGCAACCACCACTGCTAACCTCCCAGGATTCTTCAGCTGTTGTGTTGCCTGATTCAGCAAACTCACCGCTGTTTCACGATGTGTGGGACAATCAGCTAAAGTTTGACCAGTTCAGTCCCTTGATGCAGCAGGACCTTTATGGTTGTCAGGATAGCACAACCAGCAACATTCTAGATCCTCCTCCACTCTCAAACACAGTTCTTGATGACTTCTGTGCCATCAAAGAAACCGATTTTCAGAATCATCACCCTTCTGATTGTTTGGTCGGGAATAGCAACACTAGCTTCGCGCAAGATGTATCACAGATCACATCTGCTAGCTTTGCAGACTCAAAGGCCATTTCTCGCCAAGATAACTCTGGAGGAACTACTGGTACGTCTTCAAGCAATGTTGATTTTGATGATACTAGTCTGCTGCAGCAGAATAGTAAAGGCTCATGGCAGAAACTTGCTGCAACCCCTCGTGTCCGAACCTACACTAAGGTTCAAAAAACCGGGTCAGTTGGGAGGTCAATTGATGTCACAAGCTTTAGAGACTACAATGAGTTAAAAACTGCAATAGAGTGTATGTTTGGACTTGAAGGATTACTCACTCGTCCTCAAAGCTCTGGATGGAAGCTTGTGTATGTTGATTATGAGAGTGATGTTCTGCTTGTAGGAGATGATCCATGGGAAGAGTTTGTGGGATGTGTAAGGTGCATAAGGATATTGTCGCCAACAGAGGTTGAGCAGATGAGTGAAGAAGGAATGAAGCTTTTGAACAGCGCATGCATAAATGATCTCAAGTCTTCTGTTTCTAAATGA
Protein:  
MMASVEEKMKTNGLVNGGTTTTSQSSLLEEMKLLTDQSGTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGLLNRSKHPAEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGAQLSAGMRFGMMFETEDSGKRRYMGTIVGISDMDPLRWSGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTSGLKRQLHPSYFAAGETEWGSLIKRPLIRDSTNGILPYASFPNMASEQLMRMMMRTHNNNNNQNASSFMSEMQQNLLMGHGGLLGDMNMQQQPMVSEMVQPESKLTVNPSASNTSGQEQNLSQSMSAPPKPTLSGCNSGRVNHGNEQKSVEQASQVRTVAVCNESALSPLQADPCPDTSQQIYPPQSDPINGFSFLETEELTSQVSSFQSLAGSYKQPPLLTSQDSSAVVLPDSANSPLFHDVWDNQLKFDQFSPLMQQDLYGCQDSTTSNILDPPPLSNTVLDDFCAIKETDFQNHHPSDCLVGNSNTSFAQDVSQITSASFADSKAISRQDNSGGTTGTSSSNVDFDDTSLLQQNSKGSWQKLAATPRVRTYTKVQKTGSVGRSIDVTSFRDYNELKTAIECMFGLEGLLTRPQSSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVEQMSEEGMKLLNSACINDLKSSVSK